1: Bergeron A, Belcaid M, Steward GF, Poisson G.
 Divide and conquer: enriching environmental sequencing data.
PLoS ONE. 2007 Sep 5;2(9):e830.
PMID: 17786202 [PubMed]

2: Poisson G, Chauve C, Chen X, Bergeron A.
 FragAnchor: a large-scale predictor of glycosylphosphatidylinositol anchors in
eukaryote protein sequences by qualitative scoring.
Genomics Proteomics Bioinformatics. 2007 May;5(2):121-30.
PMID: 17893077 [PubMed - indexed for MEDLINE]

3: Berard S, Bergeron A, Chauve C, Paul C.
 Perfect sorting by reversals is not always difficult.
IEEE/ACM Trans Comput Biol Bioinform. 2007 Jan-Mar;4(1):4-16.
PMID: 17277409 [PubMed - indexed for MEDLINE]

4: Bergeron A, Stoye J.
 On the similarity of sets of permutations and its applications to genome
comparison.
J Comput Biol. 2006 Sep;13(7):1340-54.
PMID: 17037962 [PubMed - indexed for MEDLINE]

5: Houde M, Belcaid M, Ouellet F, Danyluk J, Monroy AF, Dryanova A, Gulick P,
Bergeron A, Laroche A, Links MG, MacCarthy L, Crosby WL, Sarhan F.
 Wheat EST resources for functional genomics of abiotic stress.
BMC Genomics. 2006 Jun 13;7:149.
PMID: 16772040 [PubMed - indexed for MEDLINE]

6: Bergeron A, Mixtacki J, Stoye J.
 On sorting by translocations.
J Comput Biol. 2006 Mar;13(2):567-78.
PMID: 16597257 [PubMed - indexed for MEDLINE]

7: Caruso ME, Jenna S, Beaulne S, Lee EH, Bergeron A, Chauve C, Roby P, Rual JF, 
Hill DE, Vidal M, Bosse© R, Chevet E.
 Biochemical clustering of monomeric GTPases of the Ras superfamily.
Mol Cell Proteomics. 2005 Jul;4(7):936-44. Epub 2005 Apr 6.
PMID: 15814614 [PubMed - indexed for MEDLINE]

8: Pasek S, Bergeron A, Risler JL, Louis A, Ollivier E, Raffinot M.
 Identification of genomic features using microsyntenies of domains: domain teams.
Genome Res. 2005 Jun;15(6):867-74. Epub 2005 May 17.
PMID: 15899966 [PubMed - indexed for MEDLINE]

9: Luc N, Risler JL, Bergeron A, Raffinot M.
 Gene teams: a new formalization of gene clusters for comparative genomics.
Comput Biol Chem. 2003 Feb;27(1):59-67.
PMID: 12798040 [PubMed - indexed for MEDLINE]

10: Bergeron A, Heber S, Stoye J.
 Common intervals and sorting by reversals: a marriage of necessity.
Bioinformatics. 2002;18 Suppl 2:S54-63.
PMID: 12385983 [PubMed - indexed for MEDLINE]

11: Bergeron A, Geanta P, Bergeron D.
 The death factors: a combinatorial analysis.
In Silico Biol. 1999;1(3):147-58.
PMID: 11471235 [PubMed - indexed for MEDLINE]

12: Bergeron A, Gaul E, Bergeron D.
 Combinatorial tools for the analysis of transcriptional regulation.
Pac Symp Biocomput. 1997:62-73.
PMID: 9390280 [PubMed - indexed for MEDLINE]